...
| No Format |
|---|
#!/bin/bash #PBS -j oe #PBS -m ae #PBS -N JobName2 #PBS -l walltime=3:00:00 #PBS -l select=1:ncpus=8:mem=32gb #PBS -M FIRSTNAME.LASTNAME@my.jcu.edu.au cd $PBS_O_WORKDIR shopt -s expand_aliases source /etc/profile.d/modules.sh echo "Job identifier is $PBS_JOBID" echo "Working directory is $PBS_O_WORKDIR" mkdir -p /fast/jc012345/myjobs cp -a myjob1.m myjob2.m myjob3.m myjob4.m myjob5.m myjob6.m myjob7.m myjob8.m /fast/jc012345/myjobs/ pushd /fast/jc012345/myjobs module load matlab matlab -r myjob1 & matlab -r myjob2 & matlab -r myjob3 & matlab -r myjob4 & matlab -r myjob5 & matlab -r myjob6 & matlab -r myjob7 & matlab -r myjob8 & wait # Wait for background jobs to finish. cp -a out1.mat out2.mat out3.mat out4.mat out5.mat out6.mat out7.mat out8.mat $PBS_O_WORKDIR/ popd rm -rf /fast/jc012345/myjobs |
Do not remove the /fast/jc012345 directoryConsider the possibility that you may be running more than one workflow at any given time. Using subdirectories is a good way of segregating workflows (at a storage layer).
Brief Details on some extra PBS/Torque directives
...