|Student Contribution Band:||Band 2|
|Administered by:||College of Public Health, Medical & Vet Sciences|
This subject provides an overview of widely used computational methods in molecular biology. Lectures describe core concepts and techniques required to analyse, visualise and interpret datasets involving many thousands of genes, genomic variants or microbial taxa. Practicals work through concrete examples of methods covered in lectures, and introduce general purpose tools such as the R language and the unix shell to efficiently work with large biological datasets. Topics covered include an introduction to R and the unix shell, differential gene expression, finding and interpreting genomic variants and metagenomics. In this subject, students will critically evaluate and plan research involving large sequencing data and bioinformatics. Students will independently prepare a grant proposal and oral presentation, demonstrating their ability apply bioinformatics tools to questions of disease or ecological processes.
|This subject assumes that students are familiar with basic probability and statistics (equivalent to second year undergraduate level), as well as some familiarity with the R programming language. Students who are unsure if they meet the assumed knowledge requirements should contact the subject coordinator.|
|Townsville, Internal, Study Period 2|
|Census Date 29-Aug-2019|
|Coordinator:||Dr Ira Cooke|
|Lecturers:||Dr Roger Huerlimann, Dr Matt Field, Dr Ashley Van Waardenberg, Dr Ira Cooke.|
The student workload for this 3 credit point subject is approximately 130 hours.
|Assessment:||end of semester exam (30%); assignments (50%); (20%).|
Note: Minor variations might occur due to the continuous Subject quality improvement process, and in case of minor variation(s) in assessment details, the Subject Outline represents the latest official information.